Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015933219.1_cds_XP_016479612.1_71136
CDS Infomation

[gene=LOC107800872] [db_xref=GeneID:107800872] [protein=uncharacterized protein LOC107800872 isoform X3] [protein_id=XP_016479612.1] [location=join(20988..21071,21692..22084,22815..23218,23360..23459,23552..23611,23868..23954,24113..24241,24340..24645)] [gbkey=CDS]
Sequence

ATGGGGCTAGAGAAGAATTATGCTGAGCTGAAAAGACAAATACCAGTCAATGAAAATCAT
AATTTTTCTAAGGAAGAAGTTGATACTGCTAATGAGGAACTGATAAAAGAAGTTGCTGTT
TTGGAGCTGGAAGTTATGTATTTAGAGAAGTATCTTCTTTCACTATACCGGAAAACATTC
GCTAAGCGGTTAGAATCACTGTCCAAAGAAAGGAAACTTTCAGAAGTCAAGAAACACAAC
AACAAATCCATGGAAAATCCAATAACTAACAGTACTAGTCCTTCTCCGTCGCCTTTCGAA
AATCCACGAGAAGAATGTAATGTGACAGCAGGAGCTCCAAACCTAGTTGACACTACTATT
GTGAGAAGCCACTCTTCATTGTCTCACACTGCTGCTTCTTTTAAGCCTTCGCCTTCAGTC
GGATTTCTTGCTGATGCTGTAGATTCATACCATTCTTTGCCTTTATCAATGCTTGAGCAT
GCTCAGGTATCCACTTCAAATGGAAGAACAGCAGAACATATTGTTAACAGTTGTTCAAAT
CATTTTCGTCGTGTCCCAAACCAGCTGTCTGAAGAAATGATTAAGTGTATATCAGCCATA
TATTTTCAGCTTGCTGATCCCCCTTTGTTCAGTTATGATTACCCGTTCTCTCCAATCTCG
TTATCATCATCAACGCTGGAATCTTTTCCTCAAGGTCAGAACGATATGGGGACTTTACAA
TGCGAAGAAAGTTCATCTTCCAATTCAACAATGAATAACCCTTTTCATGTTAAAGATTCG
AGAGAATTTAGTGGATCTTTTGTCACAATGGTTGAAGTGCAAGGGCTTTGTCGAGATAAA
CGGAGGTTAGATGGTGTAGATCACATGTTACAACATTTTAGGTATCTAGTTTCAAAATTG
GAGGAGGTTGATCCGAGAAAGCTGAAACATGAAGAGAAGCTAGCTTTCTGGATTAATGTC
CACAACGCGCTAGTGATGCATGCATTCTTAGCTTATGGAATTCCGCGAAGTAATCTCAAG
AGAGTATCTCAACTTCTCAAGGCTGCTTATAACATTGGAGGGAATACAGTAAATGTGGAG
ATGATTCAGAGTTCTATACTAGGATGTCGATTGCCCCGAGCAGGTCAGTGGATTCAATCA
TTGTTCTTTCCAAAGCAAAAGTTTAAGGCTGGAGATGCAAGAAAAGGATATGCAATAGAG
CGCCCAGACCCTCGCCTACGCTTTGCTCTATGCTCAGGAAGCCATTCTGATGCTCTGCTC
CGGTTGTACACGCCAAAGAGAGTATTCCAGGAGCTTGAAGTGGCTAAAGAAGAGTACCTT
CAGACAAACACAAGGTTAAACAAGCAACAAAAACTACTTCTACCCAAGAATGTTGAATCT
TATGCGAAGGAAAGTGATTTGTGCCCTTCTGGTTTGATGGAAATGATACAACACGCGTTA
CCTGAACATTTCATAAAGAAATATCAAGGCAAAATATTGAAGAAAATTGATTGGATTCCT
CACAACTTCACTTTCCGTTACCTAATTTCACATGAATTGCTTGAGTCCGTCTTATCCTTC
TGA

Peptide Sequence

PEP ID

XP_016479612.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107800872 isoform X3 [Nicotiana tabacum]
Sequence

MGLEKNYAELKRQIPVNENHNFSKEEVDTANEELIKEVAVLELEVMYLEKYLLSLYRKTF
AKRLESLSKERKLSEVKKHNNKSMENPITNSTSPSPSPFENPREECNVTAGAPNLVDTTI
VRSHSSLSHTAASFKPSPSVGFLADAVDSYHSLPLSMLEHAQVSTSNGRTAEHIVNSCSN
HFRRVPNQLSEEMIKCISAIYFQLADPPLFSYDYPFSPISLSSSTLESFPQGQNDMGTLQ
CEESSSSNSTMNNPFHVKDSREFSGSFVTMVEVQGLCRDKRRLDGVDHMLQHFRYLVSKL
EEVDPRKLKHEEKLAFWINVHNALVMHAFLAYGIPRSNLKRVSQLLKAAYNIGGNTVNVE
MIQSSILGCRLPRAGQWIQSLFFPKQKFKAGDARKGYAIERPDPRLRFALCSGSHSDALL
RLYTPKRVFQELEVAKEEYLQTNTRLNKQQKLLLPKNVESYAKESDLCPSGLMEMIQHAL
PEHFIKKYQGKILKKIDWIPHNFTFRYLISHELLESVLSF

Transcript Sequence

Gene sequence data has not been registered.